STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALPLAlkaline phosphatase, biomineralization associated. (524 aa)    
Predicted Functional Partners:
SPCS2
Signal peptidase complex subunit 2.
   
   0.959
ENSCAPP00000005732
annotation not available
    
 0.922
GCH1
GTP cyclohydrolase 1.
     
  0.911
TPK1
Thiamin pyrophosphokinase 1.
     
  0.911
ENSCAPP00000013328
annotation not available
     
  0.911
PTS
6-pyruvoyltetrahydropterin synthase.
     
  0.911
ENSCAPP00000001712
annotation not available
     
  0.853
ENSCAPP00000016652
annotation not available
     
  0.853
SEC11C
SEC11 homolog C, signal peptidase complex subunit.
    
 
 0.845
ENSCAPP00000018588
annotation not available
    
 
 0.845
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.