Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF126Ring finger protein 126. (297 aa)    
Predicted Functional Partners:
GET4
Guided entry of tail-anchored proteins factor 4.
   
 
 0.973
BAG6
BCL2 associated athanogene 6.
    
 
 0.969
GET3
Guided entry of tail-anchored proteins factor 3, ATPase.
    
 
 0.962
ENSCAPP00000000972
annotation not available
    
 0.865
ENSCAPP00000008606
annotation not available
    
 0.865
FAF2
Fas associated factor family member 2.
    
 0.817
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
    
 0.813
SCN1B
Sodium voltage-gated channel beta subunit 1.
    
   0.806
IMMT
Inner membrane mitochondrial protein.
    
   0.785
CDKN1A
Cyclin dependent kinase inhibitor 1A.
    
   0.785
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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