STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BABAM2BRISC and BRCA1 A complex member 2. (304 aa)    
Predicted Functional Partners:
ENSCAPP00000016428
annotation not available
    
 0.999
ABRAXAS2
Abraxas 2, BRISC complex subunit.
    
 0.997
ABRAXAS1
Abraxas 1, BRCA1 A complex subunit.
    
 0.997
ENSCAPP00000009178
annotation not available
    
 0.997
SHMT2
Serine hydroxymethyltransferase 2.
    
  0.993
ENSCAPP00000013163
annotation not available
    
 0.985
BARD1
BRCA1 associated RING domain 1.
   
 0.975
RAD51
RAD51 recombinase.
    
 0.966
SHMT1
Serine hydroxymethyltransferase 1.
    
  0.955
ANAPC5
Anaphase promoting complex subunit 5.
     
 0.943
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.