Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BABAM2BRISC and BRCA1 A complex member 2. (304 aa)    
Predicted Functional Partners:
ENSCAPP00000009178
annotation not available
    
 0.999
ENSCAPP00000016428
annotation not available
    
 0.999
ABRAXAS2
Abraxas 2, BRISC complex subunit.
    
 0.998
ABRAXAS1
Abraxas 1, BRCA1 A complex subunit.
    
 0.998
ENSCAPP00000013163
annotation not available
    
 0.998
BARD1
BRCA1 associated RING domain 1.
   
 0.998
SHMT2
Serine hydroxymethyltransferase 2.
    
 0.997
RAD51
RAD51 recombinase.
    
 0.993
SHMT1
Serine hydroxymethyltransferase 1.
    
 0.968
TP53
Tumor protein p53.
    
 0.955
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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