STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002373annotation not available (215 aa)    
Predicted Functional Partners:
ENSCAPP00000018476
annotation not available
    
 0.707
RCE1
Ras converting CAAX endopeptidase 1.
     
 0.581
ENSCAPP00000000576
annotation not available
    
  0.563
ENSCAPP00000004781
annotation not available
    
  0.563
TP53
Tumor protein p53.
    
  0.539
BRMS1
BRMS1 transcriptional repressor and anoikis regulator.
    
  0.494
SNAI1
Snail family transcriptional repressor 1.
    
 
 0.490
IFIH1
Interferon induced with helicase C domain 1.
     
  0.481
CDC25A
Cell division cycle 25A.
    
 0.481
CDC25B
Cell division cycle 25B.
    
  0.469
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.