SEC14L3 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene co-occurrence

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[Homology]

Score

SEC14L3

SEC14 like lipid binding 3. (276 aa)

Predicted Functional Partners:

SEC14L4

0.753

ENSCAPP00000002615

0.589

PPTC7

0.555

ENSCAPP00000012893

0.499

PLD2

0.472

PLD1

0.472

MS4A1

0.463

ENSCAPP00000009646

0.459

CLHC1

0.458

CLTC

0.458

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLHC1	SEC14L3	ENSCAPP00000005058	ENSCAPP00000002381	Clathrin heavy chain linker domain containing 1.	SEC14 like lipid binding 3.	0.458
CLHC1	SEC14L4	ENSCAPP00000005058	ENSCAPP00000005174	Clathrin heavy chain linker domain containing 1.	SEC14 like lipid binding 4.	0.458
CLTC	SEC14L3	ENSCAPP00000009138	ENSCAPP00000002381	Clathrin heavy chain.	SEC14 like lipid binding 3.	0.458
CLTC	SEC14L4	ENSCAPP00000009138	ENSCAPP00000005174	Clathrin heavy chain.	SEC14 like lipid binding 4.	0.458
ENSCAPP00000002615	PLD1	ENSCAPP00000002615	ENSCAPP00000009354	annotation not available	Phospholipase D1.	0.917
ENSCAPP00000002615	PLD2	ENSCAPP00000002615	ENSCAPP00000008092	annotation not available	Phospholipase D2.	0.917
ENSCAPP00000002615	SEC14L3	ENSCAPP00000002615	ENSCAPP00000002381	annotation not available	SEC14 like lipid binding 3.	0.589
ENSCAPP00000009646	SEC14L3	ENSCAPP00000009646	ENSCAPP00000002381	annotation not available	SEC14 like lipid binding 3.	0.459
ENSCAPP00000009646	SEC14L4	ENSCAPP00000009646	ENSCAPP00000005174	annotation not available	SEC14 like lipid binding 4.	0.459
ENSCAPP00000012893	SEC14L3	ENSCAPP00000012893	ENSCAPP00000002381	annotation not available	SEC14 like lipid binding 3.	0.499
ENSCAPP00000012893	SEC14L4	ENSCAPP00000012893	ENSCAPP00000005174	annotation not available	SEC14 like lipid binding 4.	0.499
MS4A1	SEC14L3	ENSCAPP00000016280	ENSCAPP00000002381	Membrane spanning 4-domains A1.	SEC14 like lipid binding 3.	0.463
MS4A1	SEC14L4	ENSCAPP00000016280	ENSCAPP00000005174	Membrane spanning 4-domains A1.	SEC14 like lipid binding 4.	0.463
PLD1	ENSCAPP00000002615	ENSCAPP00000009354	ENSCAPP00000002615	Phospholipase D1.	annotation not available	0.917
PLD1	PLD2	ENSCAPP00000009354	ENSCAPP00000008092	Phospholipase D1.	Phospholipase D2.	0.911
PLD1	SEC14L3	ENSCAPP00000009354	ENSCAPP00000002381	Phospholipase D1.	SEC14 like lipid binding 3.	0.472
PLD1	SEC14L4	ENSCAPP00000009354	ENSCAPP00000005174	Phospholipase D1.	SEC14 like lipid binding 4.	0.472
PLD2	ENSCAPP00000002615	ENSCAPP00000008092	ENSCAPP00000002615	Phospholipase D2.	annotation not available	0.917
PLD2	PLD1	ENSCAPP00000008092	ENSCAPP00000009354	Phospholipase D2.	Phospholipase D1.	0.911
PLD2	SEC14L3	ENSCAPP00000008092	ENSCAPP00000002381	Phospholipase D2.	SEC14 like lipid binding 3.	0.472