FHOD1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

FHOD1

Formin homology 2 domain containing 1. (1084 aa)

Predicted Functional Partners:

STAB1

0.937

ENSCAPP00000003219

0.913

ENSCAPP00000012887

0.881

ENSCAPP00000008807

0.836

ROCK1

0.833

ENSCAPP00000001344

0.823

ENSCAPP00000010007

0.823

ENSCAPP00000016364

0.672

ENSCAPP00000001998

0.607

METTL3

0.583

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

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... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000001344	ENSCAPP00000001998	ENSCAPP00000001344	ENSCAPP00000001998	annotation not available	annotation not available	0.864
ENSCAPP00000001344	ENSCAPP00000003219	ENSCAPP00000001344	ENSCAPP00000003219	annotation not available	annotation not available	0.949
ENSCAPP00000001344	ENSCAPP00000008807	ENSCAPP00000001344	ENSCAPP00000008807	annotation not available	annotation not available	0.942
ENSCAPP00000001344	ENSCAPP00000010007	ENSCAPP00000001344	ENSCAPP00000010007	annotation not available	annotation not available	0.824
ENSCAPP00000001344	FHOD1	ENSCAPP00000001344	ENSCAPP00000002382	annotation not available	Formin homology 2 domain containing 1.	0.823
ENSCAPP00000001998	ENSCAPP00000001344	ENSCAPP00000001998	ENSCAPP00000001344	annotation not available	annotation not available	0.864
ENSCAPP00000001998	ENSCAPP00000003219	ENSCAPP00000001998	ENSCAPP00000003219	annotation not available	annotation not available	0.710
ENSCAPP00000001998	ENSCAPP00000008807	ENSCAPP00000001998	ENSCAPP00000008807	annotation not available	annotation not available	0.868
ENSCAPP00000001998	ENSCAPP00000010007	ENSCAPP00000001998	ENSCAPP00000010007	annotation not available	annotation not available	0.762
ENSCAPP00000001998	FHOD1	ENSCAPP00000001998	ENSCAPP00000002382	annotation not available	Formin homology 2 domain containing 1.	0.607
ENSCAPP00000003219	ENSCAPP00000001344	ENSCAPP00000003219	ENSCAPP00000001344	annotation not available	annotation not available	0.949
ENSCAPP00000003219	ENSCAPP00000001998	ENSCAPP00000003219	ENSCAPP00000001998	annotation not available	annotation not available	0.710
ENSCAPP00000003219	ENSCAPP00000008807	ENSCAPP00000003219	ENSCAPP00000008807	annotation not available	annotation not available	0.944
ENSCAPP00000003219	ENSCAPP00000010007	ENSCAPP00000003219	ENSCAPP00000010007	annotation not available	annotation not available	0.846
ENSCAPP00000003219	FHOD1	ENSCAPP00000003219	ENSCAPP00000002382	annotation not available	Formin homology 2 domain containing 1.	0.913
ENSCAPP00000008807	ENSCAPP00000001344	ENSCAPP00000008807	ENSCAPP00000001344	annotation not available	annotation not available	0.942
ENSCAPP00000008807	ENSCAPP00000001998	ENSCAPP00000008807	ENSCAPP00000001998	annotation not available	annotation not available	0.868
ENSCAPP00000008807	ENSCAPP00000003219	ENSCAPP00000008807	ENSCAPP00000003219	annotation not available	annotation not available	0.944
ENSCAPP00000008807	ENSCAPP00000010007	ENSCAPP00000008807	ENSCAPP00000010007	annotation not available	annotation not available	0.809
ENSCAPP00000008807	FHOD1	ENSCAPP00000008807	ENSCAPP00000002382	annotation not available	Formin homology 2 domain containing 1.	0.836