ENSCAPP00000002399 protein (Cavia aperea) - STRING interaction network

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSCAPP00000002399

annotation not available (108 aa)

Predicted Functional Partners:

MTREX

0.851

REXO4

0.779

ENSCAPP00000001144

0.725

TENT4A

0.725

NOB1

0.669

ENSCAPP00000003591

0.611

RBM34

0.575

DDX60

0.568

IPO7

0.568

IPO8

0.568

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX60	ENSCAPP00000001144	ENSCAPP00000003863	ENSCAPP00000001144	DExD/H-box helicase 60.	annotation not available	0.700
DDX60	ENSCAPP00000002399	ENSCAPP00000003863	ENSCAPP00000002399	DExD/H-box helicase 60.	annotation not available	0.568
DDX60	TENT4A	ENSCAPP00000003863	ENSCAPP00000005462	DExD/H-box helicase 60.	Terminal nucleotidyltransferase 4A.	0.700
ENSCAPP00000001144	DDX60	ENSCAPP00000001144	ENSCAPP00000003863	annotation not available	DExD/H-box helicase 60.	0.700
ENSCAPP00000001144	ENSCAPP00000002399	ENSCAPP00000001144	ENSCAPP00000002399	annotation not available	annotation not available	0.725
ENSCAPP00000001144	ENSCAPP00000003591	ENSCAPP00000001144	ENSCAPP00000003591	annotation not available	annotation not available	0.784
ENSCAPP00000001144	IPO7	ENSCAPP00000001144	ENSCAPP00000009879	annotation not available	Importin 7.	0.700
ENSCAPP00000001144	IPO8	ENSCAPP00000001144	ENSCAPP00000012198	annotation not available	Importin 8.	0.700
ENSCAPP00000001144	MTREX	ENSCAPP00000001144	ENSCAPP00000006585	annotation not available	Mtr4 exosome RNA helicase.	0.988
ENSCAPP00000001144	TENT4A	ENSCAPP00000001144	ENSCAPP00000005462	annotation not available	Terminal nucleotidyltransferase 4A.	0.922
ENSCAPP00000002399	DDX60	ENSCAPP00000002399	ENSCAPP00000003863	annotation not available	DExD/H-box helicase 60.	0.568
ENSCAPP00000002399	ENSCAPP00000001144	ENSCAPP00000002399	ENSCAPP00000001144	annotation not available	annotation not available	0.725
ENSCAPP00000002399	ENSCAPP00000003591	ENSCAPP00000002399	ENSCAPP00000003591	annotation not available	annotation not available	0.611
ENSCAPP00000002399	IPO7	ENSCAPP00000002399	ENSCAPP00000009879	annotation not available	Importin 7.	0.568
ENSCAPP00000002399	IPO8	ENSCAPP00000002399	ENSCAPP00000012198	annotation not available	Importin 8.	0.568
ENSCAPP00000002399	MTREX	ENSCAPP00000002399	ENSCAPP00000006585	annotation not available	Mtr4 exosome RNA helicase.	0.851
ENSCAPP00000002399	NOB1	ENSCAPP00000002399	ENSCAPP00000015410	annotation not available	NIN1 (RPN12) binding protein 1 homolog.	0.669
ENSCAPP00000002399	RBM34	ENSCAPP00000002399	ENSCAPP00000015137	annotation not available	RNA binding motif protein 34.	0.575
ENSCAPP00000002399	REXO4	ENSCAPP00000002399	ENSCAPP00000014137	annotation not available	REX4 homolog, 3'-5' exonuclease.	0.779
ENSCAPP00000002399	TENT4A	ENSCAPP00000002399	ENSCAPP00000005462	annotation not available	Terminal nucleotidyltransferase 4A.	0.725