Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IPCEF1Interaction protein for cytohesin exchange factors 1. (331 aa)    
Predicted Functional Partners:
CNKSR3
CNKSR family member 3.
 
 
 
 0.977
CYTH2
Cytohesin 2.
    
 
 0.966
ENSCAPP00000008222
annotation not available
    
 
 0.963
CYTH1
Cytohesin 1.
    
 
 0.963
SAMD12
Sterile alpha motif domain containing 12.
    
 0.836
CYTH4
Cytohesin 4.
    
 
 0.825
ARAF
A-Raf proto-oncogene, serine/threonine kinase.
    
 0.812
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
    
 0.812
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.812
KSR2
Kinase suppressor of ras 2.
    
 0.785
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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