HNRNPAB protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

HNRNPAB

Heterogeneous nuclear ribonucleoprotein A/B. (205 aa)

Predicted Functional Partners:

SYNCRIP

0.971

CSDE1

0.943

ENSCAPP00000017678

0.907

ENSCAPP00000006614

0.894

YBX1

0.885

ELAVL1

0.835

LEO1

0.833

PTBP1

0.832

PABPC4L

0.822

ENSCAPP00000003691

0.812

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	ENSCAPP00000017678	ENSCAPP00000014863	ENSCAPP00000017678	Cold shock domain containing E1.	annotation not available	0.572
CSDE1	HNRNPAB	ENSCAPP00000014863	ENSCAPP00000002406	Cold shock domain containing E1.	Heterogeneous nuclear ribonucleoprotein A/B.	0.943
CSDE1	PABPC4L	ENSCAPP00000014863	ENSCAPP00000000572	Cold shock domain containing E1.	poly(A) binding protein cytoplasmic 4 like.	0.819
CSDE1	SYNCRIP	ENSCAPP00000014863	ENSCAPP00000015469	Cold shock domain containing E1.	Synaptotagmin binding cytoplasmic RNA interacting protein.	0.953
CSDE1	YBX1	ENSCAPP00000014863	ENSCAPP00000003553	Cold shock domain containing E1.	Y-box binding protein 1.	0.938
ELAVL1	ENSCAPP00000003691	ENSCAPP00000006967	ENSCAPP00000003691	ELAV like RNA binding protein 1.	annotation not available	0.715
ELAVL1	ENSCAPP00000006614	ENSCAPP00000006967	ENSCAPP00000006614	ELAV like RNA binding protein 1.	annotation not available	0.812
ELAVL1	ENSCAPP00000017678	ENSCAPP00000006967	ENSCAPP00000017678	ELAV like RNA binding protein 1.	annotation not available	0.441
ELAVL1	HNRNPAB	ENSCAPP00000006967	ENSCAPP00000002406	ELAV like RNA binding protein 1.	Heterogeneous nuclear ribonucleoprotein A/B.	0.835
ELAVL1	PABPC4L	ENSCAPP00000006967	ENSCAPP00000000572	ELAV like RNA binding protein 1.	poly(A) binding protein cytoplasmic 4 like.	0.556
ELAVL1	PTBP1	ENSCAPP00000006967	ENSCAPP00000008442	ELAV like RNA binding protein 1.	Polypyrimidine tract binding protein 1.	0.781
ELAVL1	SYNCRIP	ENSCAPP00000006967	ENSCAPP00000015469	ELAV like RNA binding protein 1.	Synaptotagmin binding cytoplasmic RNA interacting protein.	0.560
ELAVL1	YBX1	ENSCAPP00000006967	ENSCAPP00000003553	ELAV like RNA binding protein 1.	Y-box binding protein 1.	0.514
ENSCAPP00000003691	ELAVL1	ENSCAPP00000003691	ENSCAPP00000006967	annotation not available	ELAV like RNA binding protein 1.	0.715
ENSCAPP00000003691	ENSCAPP00000006614	ENSCAPP00000003691	ENSCAPP00000006614	annotation not available	annotation not available	0.938
ENSCAPP00000003691	ENSCAPP00000017678	ENSCAPP00000003691	ENSCAPP00000017678	annotation not available	annotation not available	0.849
ENSCAPP00000003691	HNRNPAB	ENSCAPP00000003691	ENSCAPP00000002406	annotation not available	Heterogeneous nuclear ribonucleoprotein A/B.	0.812
ENSCAPP00000003691	PABPC4L	ENSCAPP00000003691	ENSCAPP00000000572	annotation not available	poly(A) binding protein cytoplasmic 4 like.	0.480
ENSCAPP00000003691	PTBP1	ENSCAPP00000003691	ENSCAPP00000008442	annotation not available	Polypyrimidine tract binding protein 1.	0.865
ENSCAPP00000003691	SYNCRIP	ENSCAPP00000003691	ENSCAPP00000015469	annotation not available	Synaptotagmin binding cytoplasmic RNA interacting protein.	0.846