Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002410annotation not available (69 aa)    
Predicted Functional Partners:
SARDH
Sarcosine dehydrogenase.
   
 
 0.972
MAT2A
Methionine adenosyltransferase 2A.
   
 
 0.964
MAT1A
Methionine adenosyltransferase 1A.
   
 
 0.962
AHCY
Adenosylhomocysteinase.
   
 
 0.961
DMGDH
Dimethylglycine dehydrogenase.
   
 
 0.960
MAT2B
Methionine adenosyltransferase 2B.
     
 0.958
PIPOX
Pipecolic acid and sarcosine oxidase.
   
 
 0.956
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
   
 
 0.953
AMD1
Adenosylmethionine decarboxylase 1.
     
 0.949
AHCYL1
Adenosylhomocysteinase like 1.
   
 
 0.949
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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