Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBBP8NLRBBP8 N-terminal like. (577 aa)    
Predicted Functional Partners:
ENSCAPP00000006375
annotation not available
    
 0.917
DLK1
Delta like non-canonical Notch ligand 1.
    
  0.833
CDK2
Cyclin dependent kinase 2.
    
 0.705
CCNA1
Cyclin A1.
     
 0.632
ENSCAPP00000014263
annotation not available
    
 0.581
TP53
Tumor protein p53.
    
 
 0.574
CDK18
Cyclin dependent kinase 18.
   
 0.554
PLAGL2
PLAG1 like zinc finger 2.
   
  
 0.548
CCNA2
Cyclin A2.
     
 0.536
CDK17
Cyclin dependent kinase 17.
   
 0.512
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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