STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTR3A5-hydroxytryptamine receptor 3A. (461 aa)    
Predicted Functional Partners:
HTR3B
5-hydroxytryptamine receptor 3B.
   
0.976
CACNG3
Calcium voltage-gated channel auxiliary subunit gamma 3.
   
 
  0.921
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
     
 0.889
ENSCAPP00000000243
annotation not available
     
 0.883
GRIK5
Glutamate ionotropic receptor kainate type subunit 5.
    
 0.883
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
 
 0.881
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
     
 0.881
GRIK4
Glutamate ionotropic receptor kainate type subunit 4.
    
 0.874
GRIN2D
Glutamate ionotropic receptor NMDA type subunit 2D.
     
 0.873
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
     
 0.860
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.