STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTR3A5-hydroxytryptamine receptor 3A. (461 aa)    
Predicted Functional Partners:
HTR3B
5-hydroxytryptamine receptor 3B.
   
 0.993
MRPL58
Mitochondrial ribosomal protein L58.
     
  0.708
HTR2A
5-hydroxytryptamine receptor 2A.
      
 0.674
POMT2
Protein O-mannosyltransferase 2.
    
   0.670
ENSCAPP00000015377
annotation not available
   
  0.587
HTR1F
5-hydroxytryptamine receptor 1F.
   
  
 0.576
DEGS2
Delta 4-desaturase, sphingolipid 2.
      
 0.567
HTR5A
5-hydroxytryptamine receptor 5A.
   
  
 0.554
ENSCAPP00000003482
annotation not available
      
 0.542
HTR2C
5-hydroxytryptamine receptor 2C.
   
  
 0.542
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.