STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB2Damage specific DNA binding protein 2. (365 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.999
CUL4A
Cullin 4A.
    
 0.997
RBX1
Ring-box 1.
    
 0.991
ENSCAPP00000008193
annotation not available
    
 0.970
COP1
COP1 E3 ubiquitin ligase.
    
 0.962
DCAF5
DDB1 and CUL4 associated factor 5.
     
 0.961
ENSCAPP00000014144
annotation not available
     
 0.961
DDA1
DET1 and DDB1 associated 1.
    
 0.960
DTL
Denticleless E3 ubiquitin protein ligase homolog.
   
 0.958
ENSCAPP00000006310
annotation not available
    
 0.953
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.