Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002434annotation not available (180 aa)    
Predicted Functional Partners:
ENSCAPP00000006417
annotation not available
  
 0.919
SEPHS2
Selenophosphate synthetase 2.
  
 
 0.900
ENSCAPP00000018390
annotation not available
 
      0.899
SEPHS1
Selenophosphate synthetase 1.
  
 
 0.878
SCLY
Selenocysteine lyase.
   
 0.878
CTH
Cystathionine gamma-lyase.
    
 0.869
ENSCAPP00000013365
annotation not available
  
 0.869
KYAT3
Kynurenine aminotransferase 3.
  
 0.869
TXNRD1
Thioredoxin reductase 1.
    
  0.868
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
  0.865
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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