STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR7LAldo-keto reductase family 7 like (gene/pseudogene). (332 aa)    
Predicted Functional Partners:
NUP107
Nucleoporin 107.
    
 0.828
SEH1L
SEH1 like nucleoporin.
    
 0.807
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.806
KCNA5
Potassium voltage-gated channel subfamily A member 5.
   
 0.713
KCNA4
Potassium voltage-gated channel subfamily A member 4.
   
 0.713
KCNA2
Potassium voltage-gated channel subfamily A member 2.
   
 0.713
ENSCAPP00000011178
annotation not available
   
 0.713
KCNA10
Potassium voltage-gated channel subfamily A member 10.
   
 0.713
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 
  0.701
ENSCAPP00000006003
annotation not available
    
 0.699
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.