STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDH23-hydroxybutyrate dehydrogenase 2. (245 aa)    
Predicted Functional Partners:
BDH1
3-hydroxybutyrate dehydrogenase 1.
     
 0.936
OXCT1
3-oxoacid CoA-transferase 1.
  
 0.929
HMGCL
3-hydroxy-3-methylglutaryl-CoA lyase.
    
 0.916
KDM2B
Lysine demethylase 2B.
    
  0.834
KDM2A
Lysine demethylase 2A.
    
  0.834
ENSCAPP00000013591
annotation not available
    
  0.834
FBXL19
F-box and leucine rich repeat protein 19.
    
  0.834
ENSCAPP00000004251
annotation not available
  
 0.833
AACS
acetoacetyl-CoA synthetase.
    
 0.830
OXSM
3-oxoacyl-ACP synthase, mitochondrial.
  
 0.829
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.