Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GUCY1B1Guanylate cyclase 1 soluble subunit beta 1. (594 aa)    
Predicted Functional Partners:
GUCY1A1
Guanylate cyclase 1 soluble subunit alpha 1.
   
 0.999
PDE6D
Phosphodiesterase 6D.
    
 0.978
PDE5A
Phosphodiesterase 5A.
   
 0.974
PDE1C
Phosphodiesterase 1C.
     
 0.964
PDE2A
Phosphodiesterase 2A.
   
 0.958
PDE1A
Phosphodiesterase 1A.
     
 0.957
PDE10A
Phosphodiesterase 10A.
   
 0.946
PRKG1
Protein kinase cGMP-dependent 1.
  
 0.943
ENSCAPP00000004076
annotation not available
    
 0.942
ENSCAPP00000007529
annotation not available
  
 0.942
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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