Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AVILAdvillin. (699 aa)    
Predicted Functional Partners:
VIL1
Villin 1.
   
   0.961
ENSCAPP00000007697
annotation not available
   
   0.880
COG6
Component of oligomeric golgi complex 6.
   
 0.818
ENSCAPP00000017221
annotation not available
    
 0.814
COG3
Component of oligomeric golgi complex 3.
    
 0.811
COG4
Component of oligomeric golgi complex 4.
    
 0.800
ACTR3
Actin related protein 3.
    
 
 0.727
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
  0.676
ARL1
ADP ribosylation factor like GTPase 1.
    
 
 0.623
ENSCAPP00000006710
annotation not available
      
 0.587
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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