STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVILAdvillin. (699 aa)    
Predicted Functional Partners:
ENSCAPP00000017221
annotation not available
    
 0.822
COG6
Component of oligomeric golgi complex 6.
    
 0.815
COG3
Component of oligomeric golgi complex 3.
    
 0.812
COG4
Component of oligomeric golgi complex 4.
    
 0.756
ACTR3
Actin related protein 3.
    
 
 0.666
MPP1
Membrane palmitoylated protein 1.
    
  0.553
TWF2
Twinfilin actin binding protein 2.
    
 0.545
TWF1
Twinfilin actin binding protein 1.
    
 0.519
PLCG2
Phospholipase C gamma 2.
    
 
 0.518
ARL1
ADP ribosylation factor like GTPase 1.
    
 
 0.512
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.