STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALNT18Polypeptide N-acetylgalactosaminyltransferase 18. (545 aa)    
Predicted Functional Partners:
GCNT1
Glucosaminyl (N-acetyl) transferase 1.
     
 0.937
ST6GALNAC1
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1.
     
 0.934
C1GALT1
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.929
OSBPL6
Oxysterol binding protein like 6.
      
 0.684
DNPEP
Aspartyl aminopeptidase.
      
 0.683
NCAPH2
non-SMC condensin II complex subunit H2.
      
 0.603
ENSCAPP00000006004
annotation not available
    
 
 0.594
SEZ6L
Seizure related 6 homolog like.
    
 
 0.581
CFAP54
Cilia and flagella associated protein 54.
      
 0.569
B3GALT2
Beta-1,3-galactosyltransferase 2.
     
 0.568
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.