STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITX1Paired like homeodomain 1. (267 aa)    
Predicted Functional Partners:
ENSCAPP00000007831
annotation not available
   
  
 0.585
TBX4
T-box transcription factor 4.
    
 
 0.561
MCM6
Minichromosome maintenance complex component 6.
      
 0.556
CTNNB1
Catenin beta 1.
    
 
 0.553
POU1F1
POU class 1 homeobox 1.
   
 
 0.514
TBX19
T-box transcription factor 19.
   
 
 0.506
EGR1
Early growth response 1.
    
 
 0.485
SOX15
SRY-box transcription factor 15.
    
 
 0.481
LHX3
LIM homeobox 3.
   
  
 0.478
ENSCAPP00000004704
annotation not available
    
   0.463
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.