Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMFRAutocrine motility factor receptor. (549 aa)    
Predicted Functional Partners:
DERL1
Derlin 1.
    
 0.998
VCP
Valosin containing protein.
    
 0.998
ENSCAPP00000003228
annotation not available
    
 0.996
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 0.996
UBE2G2
Ubiquitin conjugating enzyme E2 G2.
    
 0.995
SELENOS
Selenoprotein S.
   
 0.993
ENSCAPP00000017642
annotation not available
   
 0.991
DERL2
Derlin 2.
    
 0.987
INSIG1
Insulin induced gene 1.
    
 
 0.987
FAF2
Fas associated factor family member 2.
    
 0.983
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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