STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMFRAutocrine motility factor receptor. (549 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
    
 0.996
DERL1
Derlin 1.
    
 0.995
UBE2G2
Ubiquitin conjugating enzyme E2 G2.
    
 0.993
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 0.986
SELENOS
Selenoprotein S.
    
 0.961
ENSCAPP00000003228
annotation not available
    
 0.956
DERL2
Derlin 2.
    
 0.946
ENSCAPP00000017700
annotation not available
   
 0.943
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.940
HM13
Histocompatibility minor 13.
   
 0.938
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.