STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPTNKaptin, actin binding protein. (360 aa)    
Predicted Functional Partners:
ITFG2
Integrin alpha FG-GAP repeat containing 2.
    
 0.999
C12orf66
Chromosome 12 open reading frame 66.
    
 0.999
NPRL2
NPR2 like, GATOR1 complex subunit.
   
 0.992
NPRL3
NPR3 like, GATOR1 complex subunit.
    
 0.991
WDR24
WD repeat domain 24.
   
 0.991
MIOS
Meiosis regulator for oocyte development.
    
 0.990
WDR59
WD repeat domain 59.
    
 0.990
ENSCAPP00000003687
annotation not available
    
 0.989
SEH1L
SEH1 like nucleoporin.
    
 0.988
BMT2
Base methyltransferase of 25S rRNA 2 homolog.
    
 0.974
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.