STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002499annotation not available (230 aa)    
Predicted Functional Partners:
SRM
Spermidine synthase.
     
 0.887
AMD1
Adenosylmethionine decarboxylase 1.
    
 0.863
MAT1A
Methionine adenosyltransferase 1A.
  
 
 0.815
MAT2A
Methionine adenosyltransferase 2A.
  
 
 0.815
MTAP
Methylthioadenosine phosphorylase.
  
 
 0.813
ENSCAPP00000006527
annotation not available
  
 
 0.813
ODC1
Ornithine decarboxylase 1.
  
 0.813
AGMAT
Agmatinase.
  
 
 0.807
ARG2
Arginase 2.
  
 
 0.784
SMOX
Spermine oxidase.
     
 0.784
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.