Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GEMIN8Gem nuclear organelle associated protein 8. (234 aa)    
Predicted Functional Partners:
GEMIN4
Gem nuclear organelle associated protein 4.
    
 0.999
GEMIN5
Gem nuclear organelle associated protein 5.
    
 0.999
STRAP
Serine/threonine kinase receptor associated protein.
    
 0.999
GEMIN7
Gem nuclear organelle associated protein 7.
   
 0.999
DDX20
DEAD-box helicase 20.
    
 0.998
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
  0.996
ENSCAPP00000009578
annotation not available
    
 0.996
ENSCAPP00000001161
annotation not available
    
  0.974
SNRPB
Small nuclear ribonucleoprotein polypeptides B and B1.
   
 0.970
GEMIN6
Gem nuclear organelle associated protein 6.
     
 0.969
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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