Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002518annotation not available (112 aa)    
Predicted Functional Partners:
HSD17B13
Hydroxysteroid 17-beta dehydrogenase 13.
   
  0.641
INO80
INO80 complex ATPase subunit.
    
   0.618
ENSCAPP00000012893
annotation not available
    
   0.617
SLC23A2
Solute carrier family 23 member 2.
    
 
 0.603
VPS72
Vacuolar protein sorting 72 homolog.
    
   0.603
ENSCAPP00000004434
annotation not available
   
  0.590
DHRS3
Dehydrogenase/reductase 3.
    
  0.577
SDR16C5
Short chain dehydrogenase/reductase family 16C member 5.
    
  0.577
ENSCAPP00000010012
annotation not available
    
  0.577
ENSCAPP00000010211
annotation not available
    
  0.577
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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