Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACKR3Atypical chemokine receptor 3. (362 aa)    
Predicted Functional Partners:
CXCR4
C-X-C motif chemokine receptor 4.
    
 0.996
ENSCAPP00000016211
annotation not available
    
 0.995
ATP5F1B
ATP synthase F1 subunit beta.
    
   0.959
ATP5F1A
ATP synthase F1 subunit alpha.
    
   0.959
ENSCAPP00000007856
annotation not available
    
   0.959
ARRB2
Arrestin beta 2.
    
 0.950
ATP5F1D
ATP synthase F1 subunit delta.
    
   0.947
CXCL11
C-X-C motif chemokine ligand 11.
    
 0.933
ARRB1
Arrestin beta 1.
    
 0.843
SAG
S-antigen visual arrestin.
    
 0.690
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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