Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF122Ring finger protein 122. (154 aa)    
Predicted Functional Partners:
ENSCAPP00000008686
annotation not available
   
 0.655
UBOX5
U-box domain containing 5.
    
 0.616
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.559
ENSCAPP00000010366
annotation not available
    
 0.559
ENSCAPP00000000492
annotation not available
    
  0.557
ENSCAPP00000004155
annotation not available
    
  0.557
ENSCAPP00000014462
annotation not available
    
  0.557
ENSCAPP00000017721
annotation not available
      
 0.549
ENSCAPP00000007915
annotation not available
      
 0.529
CDC26
Cell division cycle 26.
     
 0.505
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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