Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B9D1B9 domain containing 1. (205 aa)    
Predicted Functional Partners:
B9D2
B9 domain containing 2.
   
 0.999
TMEM231
Transmembrane protein 231.
    
 0.999
MKS1
MKS transition zone complex subunit 1.
    
 0.999
TCTN1
Tectonic family member 1.
    
 0.997
ENSCAPP00000006047
annotation not available
    
 0.997
CC2D2A
Coiled-coil and C2 domain containing 2A.
    
 0.996
TMEM67
Transmembrane protein 67.
     
 0.992
TMEM107
Transmembrane protein 107.
   
 0.991
TMEM216
Transmembrane protein 216.
     
 0.976
TMEM17
Transmembrane protein 17.
    
 0.968
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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