Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASCC1Activating signal cointegrator 1 complex subunit 1. (332 aa)    
Predicted Functional Partners:
ENSCAPP00000010752
annotation not available
    
 0.999
ASCC3
Activating signal cointegrator 1 complex subunit 3.
    
 0.998
TRIP4
Thyroid hormone receptor interactor 4.
   
 
 0.986
ALKBH3
alkB homolog 3, alpha-ketoglutaratedependent dioxygenase.
    
 0.971
XRCC4
X-ray repair cross complementing 4.
     
  0.942
FANCD2
FA complementation group D2.
   
 
  0.915
KDM1A
Lysine demethylase 1A.
     
  0.913
RCOR1
REST corepressor 1.
     
  0.913
LIG4
DNA ligase 4.
     
  0.913
ATM
ATM serine/threonine kinase.
     
  0.913
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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