ENSCAPP00000002544 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCAPP00000002544

annotation not available (103 aa)

Predicted Functional Partners:

VOPP1

0.748

ENSCAPP00000014715

0.611

WWOX

0.569

ENSCAPP00000015680

0.569

TMEM25

0.562

FKBP6

0.475

CLDN16

0.471

PNLDC1

0.454

LEO1

0.435

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLDN16	ENSCAPP00000002544	ENSCAPP00000013197	ENSCAPP00000002544	Claudin 16.	annotation not available	0.471
ENSCAPP00000002544	CLDN16	ENSCAPP00000002544	ENSCAPP00000013197	annotation not available	Claudin 16.	0.471
ENSCAPP00000002544	ENSCAPP00000014715	ENSCAPP00000002544	ENSCAPP00000014715	annotation not available	annotation not available	0.611
ENSCAPP00000002544	ENSCAPP00000015680	ENSCAPP00000002544	ENSCAPP00000015680	annotation not available	annotation not available	0.569
ENSCAPP00000002544	FKBP6	ENSCAPP00000002544	ENSCAPP00000007309	annotation not available	FKBP prolyl isomerase 6.	0.475
ENSCAPP00000002544	LEO1	ENSCAPP00000002544	ENSCAPP00000016497	annotation not available	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.435
ENSCAPP00000002544	PNLDC1	ENSCAPP00000002544	ENSCAPP00000010671	annotation not available	PARN like, ribonuclease domain containing 1.	0.454
ENSCAPP00000002544	TMEM25	ENSCAPP00000002544	ENSCAPP00000011174	annotation not available	Transmembrane protein 25.	0.562
ENSCAPP00000002544	VOPP1	ENSCAPP00000002544	ENSCAPP00000005097	annotation not available	VOPP1 WW domain binding protein.	0.748
ENSCAPP00000002544	WWOX	ENSCAPP00000002544	ENSCAPP00000007818	annotation not available	WW domain containing oxidoreductase.	0.569
ENSCAPP00000014715	ENSCAPP00000002544	ENSCAPP00000014715	ENSCAPP00000002544	annotation not available	annotation not available	0.611
ENSCAPP00000014715	ENSCAPP00000015680	ENSCAPP00000014715	ENSCAPP00000015680	annotation not available	annotation not available	0.459
ENSCAPP00000014715	FKBP6	ENSCAPP00000014715	ENSCAPP00000007309	annotation not available	FKBP prolyl isomerase 6.	0.454
ENSCAPP00000015680	ENSCAPP00000002544	ENSCAPP00000015680	ENSCAPP00000002544	annotation not available	annotation not available	0.569
ENSCAPP00000015680	ENSCAPP00000014715	ENSCAPP00000015680	ENSCAPP00000014715	annotation not available	annotation not available	0.459
ENSCAPP00000015680	FKBP6	ENSCAPP00000015680	ENSCAPP00000007309	annotation not available	FKBP prolyl isomerase 6.	0.505
FKBP6	ENSCAPP00000002544	ENSCAPP00000007309	ENSCAPP00000002544	FKBP prolyl isomerase 6.	annotation not available	0.475
FKBP6	ENSCAPP00000014715	ENSCAPP00000007309	ENSCAPP00000014715	FKBP prolyl isomerase 6.	annotation not available	0.454
FKBP6	ENSCAPP00000015680	ENSCAPP00000007309	ENSCAPP00000015680	FKBP prolyl isomerase 6.	annotation not available	0.505
LEO1	ENSCAPP00000002544	ENSCAPP00000016497	ENSCAPP00000002544	LEO1 homolog, Paf1/RNA polymerase II complex component.	annotation not available	0.435