Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TPD52L2TPD52 like 2. (136 aa)    
Predicted Functional Partners:
TPD52
Tumor protein D52.
   
   0.960
TPD52L1
TPD52 like 1.
    
   0.959
GABPB1
GA binding protein transcription factor subunit beta 1.
    
  0.959
GABPA
GA binding protein transcription factor subunit alpha.
    
   0.940
ENSCAPP00000012029
annotation not available
   
   0.883
MRPS2
Mitochondrial ribosomal protein S2.
    
   0.790
NUB1
Negative regulator of ubiquitin like proteins 1.
      
 0.783
MAL2
Mal, T cell differentiation protein 2 (gene/pseudogene).
    
 
 0.714
PYROXD2
Pyridine nucleotide-disulphide oxidoreductase domain 2.
      
 0.707
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
  
 0.687
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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