Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002553annotation not available (447 aa)    
Predicted Functional Partners:
GLI1
GLI family zinc finger 1.
    
 0.947
GLI2
GLI family zinc finger 2.
    
 0.938
SUFU
SUFU negative regulator of hedgehog signaling.
     
 0.933
ATG9B
Autophagy related 9B.
   
 0.927
ATG101
Autophagy related 101.
    
 0.924
ULK2
Unc-51 like autophagy activating kinase 2.
    
 
 0.913
ENSCAPP00000007435
annotation not available
    
 
 0.912
ENSCAPP00000002906
annotation not available
   
 0.902
MTOR
Mechanistic target of rapamycin kinase.
    
 0.902
ENSCAPP00000005383
annotation not available
    
 0.892
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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