Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002555annotation not available (144 aa)    
Predicted Functional Partners:
ENSCAPP00000003685
annotation not available
      
 0.749
VAT1L
Vesicle amine transport 1 like.
      
 0.676
RAD21
RAD21 cohesin complex component.
      
 0.569
MEIOC
Meiosis specific with coiled-coil domain.
      
 0.569
MAJIN
Membrane anchored junction protein.
      
 0.569
OSBPL7
Oxysterol binding protein like 7.
      
 0.452
ENSCAPP00000006838
annotation not available
      
 0.452
ZNF567
Zinc finger protein 567.
      
 0.452
MSH4
mutS homolog 4.
      
 0.443
RNF144A
Ring finger protein 144A.
      
 0.408
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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