Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHSRPKH-type splicing regulatory protein. (603 aa)    
Predicted Functional Partners:
ENSCAPP00000009619
annotation not available
   
   0.997
FUBP3
Far upstream element binding protein 3.
   
   0.950
EXOSC2
Exosome component 2.
   
  0.946
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta.
    
  0.935
ENSCAPP00000001396
annotation not available
   
 
 0.889
ENSCAPP00000014310
annotation not available
   
 
 0.889
ENSCAPP00000015731
annotation not available
    
 
 0.860
DICER1
Dicer 1, ribonuclease III.
    
 
 0.849
ENSCAPP00000017855
annotation not available
    
 
 0.842
AKT1
AKT serine/threonine kinase 1.
   
 0.840
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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