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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002562annotation not available (235 aa)    
Predicted Functional Partners:
NOTCH2
Notch receptor 2.
    
 0.953
NOTCH1
Notch receptor 1.
    
 0.937
MFNG
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
  
  
 
0.908
NOTCH3
Notch receptor 3.
    
 0.883
NOTCH4
Notch receptor 4.
   
 0.836
NELFB
Negative elongation factor complex member B.
   
 0.812
RFNG
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
  
  
 
0.802
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.757
POLR2F
RNA polymerase II subunit F.
    
 0.747
POLR2I
RNA polymerase II subunit I.
    
  0.728
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.