STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35F6Solute carrier family 35 member F6. (358 aa)    
Predicted Functional Partners:
ENSCAPP00000001138
annotation not available
    
 0.614
FAF2
Fas associated factor family member 2.
   
  
 0.569
OTUD4
OTU deubiquitinase 4.
   
  
 0.557
RARS2
arginyl-tRNA synthetase 2, mitochondrial.
     
 0.549
SLC35B4
Solute carrier family 35 member B4.
      
 0.546
SLC35C1
Solute carrier family 35 member C1.
   
  
 0.533
UBQLN4
Ubiquilin 4.
      
 0.519
PEPD
Peptidase D.
    
 0.486
XPNPEP2
X-prolyl aminopeptidase 2.
    
 0.486
FASTKD3
FAST kinase domains 3.
    
 0.486
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.