STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002574annotation not available (395 aa)    
Predicted Functional Partners:
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 0.994
ENSCAPP00000010353
annotation not available
   
 0.972
EEF1D
Eukaryotic translation elongation factor 1 delta.
   
 0.944
VARS1
valyl-tRNA synthetase 1.
   
 0.938
ENSCAPP00000018483
annotation not available
  
 0.930
PAPSS2
3'-phosphoadenosine 5'-phosphosulfate synthase 2.
 
   
  0.926
ENSCAPP00000016878
annotation not available
   
 0.923
RPL32
Ribosomal protein L32.
   
 0.922
RPS5
Ribosomal protein S5.
  
 0.922
ENSCAPP00000009223
annotation not available
   
 0.921
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.