Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMLNLeishmanolysin like peptidase. (630 aa)    
Predicted Functional Partners:
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.951
EIF2B5
Eukaryotic translation initiation factor 2B subunit epsilon.
     
  0.759
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
     
  0.759
EIF2B1
Eukaryotic translation initiation factor 2B subunit alpha.
     
  0.759
RMC1
Regulator of MON1-CCZ1.
     
  0.759
ENSCAPP00000007740
annotation not available
     
  0.759
EIF2B2
Eukaryotic translation initiation factor 2B subunit beta.
     
  0.759
EIF2B3
Eukaryotic translation initiation factor 2B subunit gamma.
     
  0.747
ATG13
Autophagy related 13.
    
 0.706
MON1A
MON1 homolog A, secretory trafficking associated.
     
  0.686
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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