Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F5Coagulation factor V. (1659 aa)    
Predicted Functional Partners:
ATP7B
ATPase copper transporting beta.
  
 
 0.704
FECH
Ferrochelatase.
   
 
 0.648
ENSCAPP00000007382
annotation not available
     
 0.630
FXN
Frataxin.
     
 0.610
SLC40A1
Solute carrier family 40 member 1.
    
 0.610
ENSCAPP00000016895
annotation not available
   
 0.569
NRP2
Neuropilin 2.
     
  0.518
PEX12
Peroxisomal biogenesis factor 12.
    
 
 0.514
ENSCAPP00000003592
annotation not available
    
 0.506
GGNBP2
Gametogenetin binding protein 2.
    
 0.506
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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