STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F5Coagulation factor V. (1659 aa)    
Predicted Functional Partners:
ATP7B
ATPase copper transporting beta.
  
 
 0.776
SLC40A1
Solute carrier family 40 member 1.
    
 0.713
ENSCAPP00000007382
annotation not available
     
 0.694
FECH
Ferrochelatase.
   
 
 0.689
ENSCAPP00000016895
annotation not available
   
 0.656
FXN
Frataxin.
     
 0.653
PEX12
Peroxisomal biogenesis factor 12.
    
 
 0.607
ENSCAPP00000006834
annotation not available
     
 0.597
PEX10
Peroxisomal biogenesis factor 10.
    
 
 0.591
ENSCAPP00000005147
annotation not available
    
 0.559
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.