IMPG2 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

IMPG2

Interphotoreceptor matrix proteoglycan 2. (966 aa)

Predicted Functional Partners:

PCARE

0.651

PRPH2

0.634

UBAC1

0.621

PDE6A

0.596

PRCD

0.593

ZNF513

0.585

RDH12

0.583

ENSCAPP00000017722

0.579

ENSCAPP00000011103

0.576

NR2E3

0.568

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000011103	ENSCAPP00000017722	ENSCAPP00000011103	ENSCAPP00000017722	annotation not available	annotation not available	0.593
ENSCAPP00000011103	IMPG2	ENSCAPP00000011103	ENSCAPP00000002591	annotation not available	Interphotoreceptor matrix proteoglycan 2.	0.576
ENSCAPP00000011103	NR2E3	ENSCAPP00000011103	ENSCAPP00000015131	annotation not available	Nuclear receptor subfamily 2 group E member 3.	0.554
ENSCAPP00000011103	PCARE	ENSCAPP00000011103	ENSCAPP00000003367	annotation not available	Photoreceptor cilium actin regulator.	0.612
ENSCAPP00000011103	PDE6A	ENSCAPP00000011103	ENSCAPP00000017917	annotation not available	Phosphodiesterase 6A.	0.596
ENSCAPP00000011103	PRCD	ENSCAPP00000011103	ENSCAPP00000009812	annotation not available	Photoreceptor disc component.	0.577
ENSCAPP00000011103	PRPH2	ENSCAPP00000011103	ENSCAPP00000017176	annotation not available	Peripherin 2.	0.556
ENSCAPP00000011103	RDH12	ENSCAPP00000011103	ENSCAPP00000013703	annotation not available	Retinol dehydrogenase 12.	0.611
ENSCAPP00000011103	ZNF513	ENSCAPP00000011103	ENSCAPP00000001501	annotation not available	Zinc finger protein 513.	0.602
ENSCAPP00000017722	ENSCAPP00000011103	ENSCAPP00000017722	ENSCAPP00000011103	annotation not available	annotation not available	0.593
ENSCAPP00000017722	IMPG2	ENSCAPP00000017722	ENSCAPP00000002591	annotation not available	Interphotoreceptor matrix proteoglycan 2.	0.579
ENSCAPP00000017722	NR2E3	ENSCAPP00000017722	ENSCAPP00000015131	annotation not available	Nuclear receptor subfamily 2 group E member 3.	0.593
ENSCAPP00000017722	PCARE	ENSCAPP00000017722	ENSCAPP00000003367	annotation not available	Photoreceptor cilium actin regulator.	0.570
ENSCAPP00000017722	PDE6A	ENSCAPP00000017722	ENSCAPP00000017917	annotation not available	Phosphodiesterase 6A.	0.874
ENSCAPP00000017722	PRCD	ENSCAPP00000017722	ENSCAPP00000009812	annotation not available	Photoreceptor disc component.	0.579
ENSCAPP00000017722	PRPH2	ENSCAPP00000017722	ENSCAPP00000017176	annotation not available	Peripherin 2.	0.635
ENSCAPP00000017722	RDH12	ENSCAPP00000017722	ENSCAPP00000013703	annotation not available	Retinol dehydrogenase 12.	0.583
ENSCAPP00000017722	ZNF513	ENSCAPP00000017722	ENSCAPP00000001501	annotation not available	Zinc finger protein 513.	0.537
IMPG2	ENSCAPP00000011103	ENSCAPP00000002591	ENSCAPP00000011103	Interphotoreceptor matrix proteoglycan 2.	annotation not available	0.576
IMPG2	ENSCAPP00000017722	ENSCAPP00000002591	ENSCAPP00000017722	Interphotoreceptor matrix proteoglycan 2.	annotation not available	0.579