STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C12orf49Chromosome 12 open reading frame 49. (183 aa)    
Predicted Functional Partners:
MBTPS1
Membrane bound transcription factor peptidase, site 1.
    
 
 0.965
GNPTAB
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.
      
 0.587
TMEM41A
Transmembrane protein 41A.
      
 0.581
FAM120B
Family with sequence similarity 120B.
      
 0.549
NANS
N-acetylneuraminate synthase.
      
 0.487
ENSCAPP00000006005
annotation not available
      
 0.443
ENSCAPP00000009606
annotation not available
      
 0.438
ENSCAPP00000011081
annotation not available
      
 0.438
ENSCAPP00000008699
annotation not available
      
 0.405
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
      
 0.402
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.