STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACNA1FCalcium voltage-gated channel subunit alpha1 F. (1298 aa)    
Predicted Functional Partners:
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
   
 0.997
CACNA1D
Calcium voltage-gated channel subunit alpha1 D.
   
 
 0.993
CACNA1C
Calcium voltage-gated channel subunit alpha1 C.
   
 
 0.992
CACNG6
Calcium voltage-gated channel auxiliary subunit gamma 6.
   
 
 0.990
CACNB1
Calcium voltage-gated channel auxiliary subunit beta 1.
   
 0.989
CACNB2
Calcium voltage-gated channel auxiliary subunit beta 2.
   
 0.989
CACNB3
Calcium voltage-gated channel auxiliary subunit beta 3.
   
 0.986
CACNA2D4
Calcium voltage-gated channel auxiliary subunit alpha2delta 4.
   
 0.985
ENSCAPP00000006530
annotation not available
   
 0.983
CACNA2D2
Calcium voltage-gated channel auxiliary subunit alpha2delta 2.
   
 0.983
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.