STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002622annotation not available (90 aa)    
Predicted Functional Partners:
ENSCAPP00000000576
annotation not available
   
 0.982
ENSCAPP00000004781
annotation not available
   
 0.982
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.961
ENSCAPP00000010366
annotation not available
   
 0.961
RPL5
Ribosomal protein L5.
  
 0.952
RPL31
Ribosomal protein L31.
  
 0.952
RPL8
Ribosomal protein L8.
  
 0.949
RPL35
Ribosomal protein L35.
  
 0.948
RPL19
Ribosomal protein L19.
   
 0.948
RPL30
Ribosomal protein L30.
   
 0.948
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.