Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GCM1Glial cells missing transcription factor 1. (439 aa)    
Predicted Functional Partners:
ENSCAPP00000006579
annotation not available
    
 
 0.943
GCM2
Glial cells missing transcription factor 2.
     
 0.911
HTRA1
HtrA serine peptidase 1.
    
 
 0.822
FBXW2
F-box and WD repeat domain containing 2.
    
 
 0.800
CREBBP
CREB binding protein.
    
   0.799
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.770
SYDE2
Synapse defective Rho GTPase homolog 2.
      
 0.744
CRYAB
Crystallin alpha B.
      
 0.690
S100B
S100 calcium binding protein B.
      
 0.688
FGFR4
Fibroblast growth factor receptor 4.
    
 
 0.643
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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