close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCM1Glial cells missing transcription factor 1. (439 aa)    
Predicted Functional Partners:
GCM2
Glial cells missing transcription factor 2.
  
  
 
0.916
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.559
SYDE2
Synapse defective Rho GTPase homolog 2.
      
 0.545
ENSCAPP00000006579
annotation not available
    
 
 0.515
RBFOX1
RNA binding fox-1 homolog 1.
      
 0.438
ENSCAPP00000003676
annotation not available
    
 
 0.433
KLF6
Kruppel like factor 6.
    
 
 0.428
HTRA1
HtrA serine peptidase 1.
    
 
 0.405
FBXW2
F-box and WD repeat domain containing 2.
    
 
 0.402
ARHGAP32
Rho GTPase activating protein 32.
      
 0.400
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.