Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ADAMTS2ADAM metallopeptidase with thrombospondin type 1 motif 2. (1084 aa)    
Predicted Functional Partners:
COL5A2
Collagen type V alpha 2 chain.
   
 0.857
COL1A2
Collagen type I alpha 2 chain.
   
 0.825
ENSCAPP00000016172
annotation not available
   
 0.778
COL3A1
Collagen type III alpha 1 chain.
   
 0.765
EFEMP2
EGF containing fibulin extracellular matrix protein 2.
   
 0.670
ENSCAPP00000011777
annotation not available
      
 0.657
COL5A1
Collagen type V alpha 1 chain.
   
 0.650
FBLN5
Fibulin 5.
    
 0.625
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
      
 0.584
ENSCAPP00000006020
annotation not available
    
 0.583
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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