STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A1Solute carrier family 25 member 1. (225 aa)    
Predicted Functional Partners:
ZNF248
Zinc finger protein 248.
      
 0.921
ENSCAPP00000007139
annotation not available
    
 
 0.887
SLC13A5
Solute carrier family 13 member 5.
      
 0.873
GXYLT1
Glucoside xylosyltransferase 1.
      
 0.873
UGDH
UDP-glucose 6-dehydrogenase.
     
 0.826
DHDH
Dihydrodiol dehydrogenase.
     
  0.798
GFOD2
Glucose-fructose oxidoreductase domain containing 2.
     
  0.798
APMAP
Adipocyte plasma membrane associated protein.
     
  0.798
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
   
  
 0.690
ACLY
ATP citrate lyase.
   
 
 0.675
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.