STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002629annotation not available (288 aa)    
Predicted Functional Partners:
RUBCN
Rubicon autophagy regulator.
    
  0.751
ENSCAPP00000002045
annotation not available
    
 
 0.745
ENSCAPP00000010582
annotation not available
      
 0.687
COASY
Coenzyme A synthase.
     
 0.679
TMEM171
Transmembrane protein 171.
      
 0.661
ENSCAPP00000007740
annotation not available
    
 0.639
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
    
 0.625
ENSCAPP00000000178
annotation not available
    
 0.621
ARFGEF2
ADP ribosylation factor guanine nucleotide exchange factor 2.
      
 0.612
GDI1
GDP dissociation inhibitor 1.
    
 0.609
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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