STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C11orf74Chromosome 11 open reading frame 74. (217 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
    
 
 0.980
IFT43
Intraflagellar transport 43.
    
 
 0.978
IFT140
Intraflagellar transport 140.
    
   0.959
WDR19
WD repeat domain 19.
    
 
 0.959
WDR35
WD repeat domain 35.
    
   0.959
GTF2IRD1
GTF2I repeat domain containing 1.
      
 0.569
ABHD2
Abhydrolase domain containing 2.
      
 0.530
C14orf119
Chromosome 14 open reading frame 119.
      
 0.448
FAM102A
Family with sequence similarity 102 member A.
      
 0.441
RCSD1
RCSD domain containing 1.
      
 0.438
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.