STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFDP2Transcription factor Dp-2. (359 aa)    
Predicted Functional Partners:
E2F1
E2F transcription factor 1.
   
 0.977
ENSCAPP00000015542
annotation not available
   
 0.977
RB1
RB transcriptional corepressor 1.
   
 0.972
E2F6
E2F transcription factor 6.
  
 0.967
RBL1
RB transcriptional corepressor like 1.
   
 0.963
RBL2
RB transcriptional corepressor like 2.
   
 0.963
LIN9
Lin-9 DREAM MuvB core complex component.
   
 0.933
LIN54
Lin-54 DREAM MuvB core complex component.
   
 0.830
LIN37
Lin-37 DREAM MuvB core complex component.
    
 0.822
TFDP1
Transcription factor Dp-1.
  
 
 
0.821
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.