ENSCAPP00000002641 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

ENSCAPP00000002641

annotation not available (99 aa)

Predicted Functional Partners:

EGFR

0.940

ENSCAPP00000004583

0.812

ENSCAPP00000009425

0.812

TMEM150A

0.754

ACSS3

0.718

RNF144B

0.684

ENSCAPP00000006041

0.660

ENSCAPP00000017722

0.658

SNRPF

0.621

ENSCAPP00000015353

0.599

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACSS3	ENSCAPP00000002641	ENSCAPP00000017496	ENSCAPP00000002641	acyl-CoA synthetase short chain family member 3.	annotation not available	0.718
ACSS3	ENSCAPP00000015353	ENSCAPP00000017496	ENSCAPP00000015353	acyl-CoA synthetase short chain family member 3.	annotation not available	0.804
EGFR	ENSCAPP00000002641	ENSCAPP00000007783	ENSCAPP00000002641	Epidermal growth factor receptor.	annotation not available	0.940
ENSCAPP00000002641	ACSS3	ENSCAPP00000002641	ENSCAPP00000017496	annotation not available	acyl-CoA synthetase short chain family member 3.	0.718
ENSCAPP00000002641	EGFR	ENSCAPP00000002641	ENSCAPP00000007783	annotation not available	Epidermal growth factor receptor.	0.940
ENSCAPP00000002641	ENSCAPP00000004583	ENSCAPP00000002641	ENSCAPP00000004583	annotation not available	annotation not available	0.812
ENSCAPP00000002641	ENSCAPP00000006041	ENSCAPP00000002641	ENSCAPP00000006041	annotation not available	annotation not available	0.660
ENSCAPP00000002641	ENSCAPP00000009425	ENSCAPP00000002641	ENSCAPP00000009425	annotation not available	annotation not available	0.812
ENSCAPP00000002641	ENSCAPP00000015353	ENSCAPP00000002641	ENSCAPP00000015353	annotation not available	annotation not available	0.599
ENSCAPP00000002641	ENSCAPP00000017722	ENSCAPP00000002641	ENSCAPP00000017722	annotation not available	annotation not available	0.658
ENSCAPP00000002641	RNF144B	ENSCAPP00000002641	ENSCAPP00000002849	annotation not available	Ring finger protein 144B.	0.684
ENSCAPP00000002641	SNRPF	ENSCAPP00000002641	ENSCAPP00000004768	annotation not available	Small nuclear ribonucleoprotein polypeptide F.	0.621
ENSCAPP00000002641	TMEM150A	ENSCAPP00000002641	ENSCAPP00000015503	annotation not available	Transmembrane protein 150A.	0.754
ENSCAPP00000004583	ENSCAPP00000002641	ENSCAPP00000004583	ENSCAPP00000002641	annotation not available	annotation not available	0.812
ENSCAPP00000006041	ENSCAPP00000002641	ENSCAPP00000006041	ENSCAPP00000002641	annotation not available	annotation not available	0.660
ENSCAPP00000009425	ENSCAPP00000002641	ENSCAPP00000009425	ENSCAPP00000002641	annotation not available	annotation not available	0.812
ENSCAPP00000015353	ACSS3	ENSCAPP00000015353	ENSCAPP00000017496	annotation not available	acyl-CoA synthetase short chain family member 3.	0.804
ENSCAPP00000015353	ENSCAPP00000002641	ENSCAPP00000015353	ENSCAPP00000002641	annotation not available	annotation not available	0.599
ENSCAPP00000017722	ENSCAPP00000002641	ENSCAPP00000017722	ENSCAPP00000002641	annotation not available	annotation not available	0.658
RNF144B	ENSCAPP00000002641	ENSCAPP00000002849	ENSCAPP00000002641	Ring finger protein 144B.	annotation not available	0.684